A Novel Approach to Differential Expression Analysis of Co-occurrence Networks for Small-sampled microbiome Data
- Nandini Gadhia
- Michalis Smyrnakis
- et al.
- 2025
- IEEE Transactions on Computational Biology and Bioinformatics
Paper
Publications
9 results for Ritesh Krishna
Formulating a method to analyse the differential expression of co-occurrence networks for small-sampled microbiome data
- Nandini Amit Gadhia
- Michalis Smyrnakis
- et al.
- 2023
- BCB 2023
Conference paperRecovering individual haplotypes and a contiguous genome assembly from pooled long-read sequencing of the diamondback moth (Lepidoptera: Plutellidae)
- Samuel Whiteford
- Arjen E. Van'T Hof
- et al.
- 2022
- G3: Genes, Genomes, Genetics
PaperRe-purposing software for functional characterization of the microbiome
- Laura-Jayne Gardiner
- Niina Haiminen
- et al.
- 2021
- Microbiome
PaperUsing human in vitro transcriptome analysis to build trustworthy machine learning models for prediction of animal drug toxicity
- 2020
- Scientific Reports
PaperHierarchically Labeled Database Indexing Allows Scalable Characterization of Microbiomes
- Filippo Utro
- Niina Haiminen
- et al.
- 2020
- iScience
PaperLarge-scale and significant expression from pseudogenes in Sodalis glossinidius – A facultative bacterial endosymbiont
- Ian Goodhead
- Frances Blow
- et al.
- 2020
- Microbial Genomics
PaperThe sequence of a male-specific genome region containing the sex determination switch in Aedes aegypti
- Joe Turner
- Ritesh Krishna
- et al.
- 2018
- Parasites and Vectors
PaperAccelerating molecular discovery through data and physical sciences: Applications to peptide-membrane interactions
- Flaviu Cipcigan
- Anna Paola Carrieri
- et al.
- 2018
- Journal of Chemical Physics
Paper