Protein folding trajectory analysis using patterned clusters
- J. Feng
- L.P. Parida
- et al.
- 2005
- APBC 2005
Conference paper
Publications
245 results for Ruhong Zhou
Hydrophobic collapse in multidomain protein folding
- Ruhong Zhou
- Xuhui Huang
- et al.
- 2004
- Science
PaperComment on "can a continuum solvent model reproduce the free energy landscape of a β-hairpin folding in water?" The Poisson-Boltzmann equation
- Ruhong Zhou
- Goran Krilov
- et al.
- 2004
- Journal of Physical Chemistry B
ReviewExploring the protein folding free energy landscape: Coupling replica exchange method with P3ME/RESPA algorithm
- Ruhong Zhou
- 2004
- Journal of Molecular Graphics and Modelling
PaperDescribing protein folding kinetics by molecular dynamics simulations. 2. Example applications to alanine dipeptide and a β-hairpin peptide
- William C. Swope
- Jed W. Pitera
- et al.
- 2004
- Journal of Physical Chemistry B
PaperTrp-cage: Folding free energy landscape in explicit water
- Ruhong Zhou
- 2003
- PNAS
PaperFree energy landscape of protein folding in water: Explicit vs. implicit solvent
- Ruhong Zhou
- 2003
- Proteins: Structure, Function and Genetics
PaperSpatial profiling of protein hydrophobicity: Native vs. decoy structures
- Ruhong Zhou
- B. David Silverman
- et al.
- 2003
- Proteins: Structure, Function and Genetics
PaperBlue Matter, an application framework for molecular simulation on Blue Gene
- B.G. Fitch
- R.S. Germain
- et al.
- 2003
- Journal of Parallel and Distributed Computing
PaperCan a continuum solvent model reproduce the free energy landscape of a β-hairpin folding in water?
- Ruhong Zhou
- Bruce J. Berne
- 2002
- PNAS
Paper