Advances in systems biology modeling: 10 years of crowdsourcing DREAM challenges
- Pablo Meyer
- Julio Saez-Rodriguez
- 2021
- Cell Systems
Review
Publications
17 results for Julio Saez-Rodriguez
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data
- Jovan Tanevski
- Thin Nguyen
- et al.
- 2020
- Life Science Alliance
PaperCommunity Assessment of the Predictability of Cancer Protein and Phosphoprotein Levels from Genomics and Transcriptomics
- Mi Yang
- Francesca Petralia
- et al.
- 2020
- Cell Systems
PaperToward Explainable Anticancer Compound Sensitivity Prediction via Multimodal Attention-Based Convolutional Encoders
- Matteo Manica
- Ali Oskooei
- et al.
- 2019
- Molecular Pharmaceutics
PaperReproducible biomedical benchmarking in the cloud: Lessons from crowd-sourced data challenges
- Kyle Ellrott
- Alex Buchanan
- et al.
- 2019
- Genome Biology
PaperAssessment of network module identification across complex diseases
- Sarvenaz Choobdar
- Mehmet Eren Ahsen
- et al.
- 2019
- Nature Methods
PaperCommunity assessment to advance computational prediction of cancer drug combinations in a pharmacogenomic screen
- Michael P. Menden
- Dennis Wang
- et al.
- 2019
- Nature Communications
PaperA Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines
- Mehmet Gonen
- Barbara A. Weir
- et al.
- 2017
- Cell Systems
PaperCrowdsourcing biomedical research: Leveraging communities as innovation engines
- Julio Saez-Rodriguez
- James C. Costello
- et al.
- 2016
- Nature Reviews Genetics
ReviewA computational method for designing diverse linear epitopes including citrullinated peptides with desired binding affinities to intravenous immunoglobulin
- Rob Patro
- Raquel Norel
- et al.
- 2016
- BMC Bioinformatics
Paper