GENET: AI-Powered Interactive Visualization Workflows to Explore Biomedical Entity NetworksBc KwonNatasha Mulliganet al.2025ISMB 2025Talk
AutoPeptideML 2: An open source library for democratizing machine learning for peptide bioactivity predictionRaúl Fernández DíazLam Thanh Hoanget al.2025ISMB 2025Talk
Designing a Multi-Agent AI Framework to Mine Scientific Literature and Experiment Datasets to Support and Enrich Single-Cell AnalysesJoao Bettencourt-SilvaNatasha Mulliganet al.2025ISMB 2025Poster
LEOPARD: Linking Experimental Observations with Predictive Algorithms to reveal Response Dynamics for the single cellVibha AnandAkira Kosekiet al.2025ISMB 2025Poster
BioVERSE: A Modular Framework for Integrating Biomedical Modalities with Language Models in Precision MedicineChing-Huei TsouMichal Ozery-Flatoet al.2025ISMB 2025Poster
Improving Transcriptomic Foundation Models Through Gene-Level Error Analysis and Adaptive MaskingMichael Morris DanzigerBharath Dandalaet al.2025ISMB 2025Poster
Transcriptomic Foundation Model Evaluation: Quantifying Expression Level Discrimination Through Null Sample TestingNoa MorielMichael Morris Danzigeret al.2025ISMB 2025Poster
DOES YOUR MODEL UNDERSTAND GENES? A MODALITY-AGNOSTIC BENCHMARK OF GENE PROPERTIESYoav Kan-TorMichael Morris Danzigeret al.2025ISMB 2025Poster
Agentic AI for multi-omics and BMFM inference in drug discoveryJennifer KellyAshley Evanset al.2025ISMB 2025Poster
Harnessing biomedical foundation models for genomic feature engineering to investigate patient drug responseLaura GardinerStephen Checkleyet al.2025ISMB 2025Poster